Jupyter notebooks are a very useful tool for sharing data and analyses. They are essentially an interactive coding environment that is feature rich and has very useful and practical integrations.
Some examples of notebooks that have been used in place of materials and methods sections can be found here. These are good reference materials for thinking of how to structure your notebook based on your analyses.
The github repository where our notebooks are housed can be found here. The easiest way to obtain these notebooks that are hosted on GitHub is to clone them. You can do so with the following command:
git clone https://github.com/gencorefacility/BADAS.git
The instructions for running Jupyter Notebooks on NYU’s resources will be listed here when available, so stay tuned!
Resources for this BADAS seminar are below: