BioX Workflow

Create composable scientific workflows

Create composable bioinformatics workflows.

Your samples are either files or directory. They may be also be frogs, bacteria, and /or people, but they are first and foremost objects on a filesystem. BioX Workflow allows you to point to your samples, and enumerate over them in a series of rules. Additionally, BioXWorkflow templates away the business logic – creating directories, defined variables, defining input/output, etc – to the background where it belongs.

Global Variables

Global variables are variables that are used throughout your workflow and mostly remain the same.

Rules and Local Variables

Rules are sets of tasks that we complete per sample.