Linux Exercise

  1. Download the file to your computer from the following url Mesculenta_147_gene.gff3.gz
  2. Log into HPC.
  3. Create a directory in your scratch directory called LinuxJan2018
  4. Transfer the file to your new directory.
  5. gunzip the file and rename it to : Cassavagenes.txt
  6. Determine the number of different genes are present in the file. Hint – check the third column
  7. Save the rows that contain the word “gene” in the third column as a separate file. Call it “GeneTypes.txt