Pre-Requisites

Welcome. We’re thrilled to have you take this intro to NGS analysis with us. Before you begin, it’s important to have some foundational skills in Linux and R. Below you will find self-assessments for Linux and R. If you are unable to complete these, see our list of recommended resources (below) to help bring you up to speed in these areas.

Linux Self-Assessment:

Linux Exercise

R Self-Assessment:

https://docs.google.com/a/nyu.edu/document/d/1AdaeY7LT_QWRMgw7F73ufOkYa7aIIKKjRLk5mojZ4as/edit?usp=sharing

If you are unable to complete the Linux Self-Assessment, we recommend you go through this excellent tutorial:

CodeAcademy Linux Tutorial (1 – 2 hours)

Supplementary Materials for Linux:

Software Carpentry

Ryans Tutorials

If you are unable to complete the R Self-Assessment, we recommend you go through this tutorial:

Swirl (6 – 8 hours)

Supplementary Materials for R: